Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015798896.1_cds_XP_016462383.1_5525
CDS Infomation

[gene=LOC107785564] [db_xref=GeneID:107785564] [protein=splicing factor 3B subunit 2-like] [protein_id=XP_016462383.1] [location=join(34397..34633,38021..38140,38301..38423,38546..38608,39710..39817,40439..40516,41094..41186,41324..41410,41646..41747,41874..41993,42121..42183,42471..42604,43989..44070,44167..44225,44316..44361,45033..45124,45213..45282,45396..45467)] [gbkey=CDS]
Sequence

ATGACGGTTGAGGTAGCAAACGGGGTAGCAAACATCGTCGGCCATTCCAACGGCGATACG
AAAACTAACCCTAACGACGTCTCGAGGAAATCAAAGGAGAACGAGCGCCGCCGTAGGCGG
CGAAAGCAGAAGAAAAATAATAAGGTATCGTCTCACGGAGAAGACAGTGACACCGCCGCC
GCCTCTGCCGCCGCTGACGCTAATGGCGTTGCTGATGAGAACTCCGATTTTCAGAAGTCT
TTGGAGCAAGTTGAAGTGGAATATGTCCCAGAGAAGGCAGAGTTAGATGGCGAGTTGGAT
GAGGAATTCAGGAAGGTCTTTGAGAAATTCTGTTTCGTCGATGCTACTGGTTCTGAGGAG
AACGATAAGATGGACGAGAGTGCTGCTGATGCAGCCTTAAAGAAAAACCCTTATTCAGAT
TCAGAGGAAGAGCAGGACGCTCAGCCGAAGGAGAAGGGTATTTCTAACAAAAAGAAAAAG
CTTCAACGTAGGATGAAGATTGCAGAACTGAAACAAGTCAGCACGCGGCCTGATGTTGTT
GAGGTATGGGACGCTACTGCAGCAGACCCTAAGCTATTGGTATATCTGAAATCTTACCGA
AATACTGTTCCTGTTCCACGACACTGGAGTCAAAAACGAAAATTTTTGCAGGGGAAACGT
GGTATCGAGAAACAGCCGTTTCAACTGCCTGACTTTATAGCTGCAACAGGAATTGAGAAA
ATTAGACAAGCTTACATTGAAAAGGAAGACAGTAAGAAGCTTAAACAAAAGCAGCGGGAA
CGAATGCAGCCAAAAATGGGAAAGATGGATATTGATTATCAGGTTCTCCATGATGCCTTT
TTTAAGTATCAGACTAAACCAAAGTTGACTAGCCTTGGGGATCTATATTATGAAGGAAAG
GAGTTTGAGGTGAAGTTGAGGGAGATGAAACCTGGGACTTTGTCTCAAGAACTGAAAGAG
GCTCTTGGTATGCCTGAAGGCACTCCTCCTCCTTGGCTGATCAATATGCAGAGATATGGT
CCTCCACCCTCTTATCCTCAATTGAAGATTCTTGGACTCAATGCTCCTATTCCACCAGGA
GCCAAGTTTGGCTATCACCCTGGAGGTTGGGGTAAACCGCCTGTTGATGAGTATGGGCGC
CCTTTATATGGAGATGTCTTTGGTGTGCTGCAACAAGACCAGCCCAACTATGAGGATGAA
CCTGTTGATAAGACTAAGCATTGGGGTGACTTGGAGGAAGAGGAAGAAGAGGAGGAAGAG
GAAGTGGAAGAGGAGATGGAGGAAGAGGAACTGGAAGATGGTATTCAGTCTGTGGACAGC
CTTTCGAGTACTCCAACTGGAGTTGAGACTCCCGATGTTATTGACCTTCGGAAGCAGCAG
AGGAAGGAGCCTGAGAAGCCTCTCTACCAGGTGCTTGAAGAGAAAGAAGAAAAGGTAGCT
CCAGGAACTCTTCTTGGAACAACTCATACGTATGTGATTAACACCGGCACTCAAGACAAG
ACTGCTGCCAAAAGGGTCGATCTGCTTAAAGGTCAGAAATCAGATAGAGTTGATGTTACT
TTGGCACCTGAAGAGTTGGAACTGATGGACAATGTCCTGCCAGCCAAATACGAAGAAGCT
AGAGAAGAGGAGAAGTTGCGTAGTCAGAGAGAGGACTTCAGTGACATGGTAGCAGAGAAT
GAGAGGAAGAAGAAGCGCAAGATGCAGGAGAAAGAGGGCAAGTCGAAGAAGAAAGATTTC
AAGTTTTGA

Peptide Sequence

PEP ID

XP_016462383.1
PEP Infomation

PREDICTED: splicing factor 3B subunit 2-like [Nicotiana tabacum]
Sequence

MTVEVANGVANIVGHSNGDTKTNPNDVSRKSKENERRRRRRKQKKNNKVSSHGEDSDTAA
ASAAADANGVADENSDFQKSLEQVEVEYVPEKAELDGELDEEFRKVFEKFCFVDATGSEE
NDKMDESAADAALKKNPYSDSEEEQDAQPKEKGISNKKKKLQRRMKIAELKQVSTRPDVV
EVWDATAADPKLLVYLKSYRNTVPVPRHWSQKRKFLQGKRGIEKQPFQLPDFIAATGIEK
IRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSLGDLYYEGK
EFEVKLREMKPGTLSQELKEALGMPEGTPPPWLINMQRYGPPPSYPQLKILGLNAPIPPG
AKFGYHPGGWGKPPVDEYGRPLYGDVFGVLQQDQPNYEDEPVDKTKHWGDLEEEEEEEEE
EVEEEMEEEELEDGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPEKPLYQVLEEKEEKVA
PGTLLGTTHTYVINTGTQDKTAAKRVDLLKGQKSDRVDVTLAPEELELMDNVLPAKYEEA
REEEKLRSQREDFSDMVAENERKKKRKMQEKEGKSKKKDFKF

Transcript Sequence

Gene sequence data has not been registered.